Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Atu1201ABC transporter, nucleotide binding/ATPase protein; Belongs to the ABC transporter superfamily. (337 aa)    
Predicted Functional Partners:
dppC
ABC transporter, membrane spanning protein.
   0.891
nikB
ABC transporter, membrane spanning protein.
 
   0.847
dppD
ABC transporter, nucleotide binding/ATPase protein; Belongs to the ABC transporter superfamily.
 
    
0.808
Atu3214
ABC transporter, membrane spanning protein (oligopeptide).
 
   0.802
Atu4523
ABC transporter, membrane spanning protein (oligopeptide).
 
   0.796
Atu3378
ABC transporter, membrane spanning protein (oligopeptide).
 
   0.794
Atu3435
ABC transporter, membrane spanning protein (oligopeptide).
 
   0.793
Atu3037
ABC transporter, membrane spanning protein (dipeptide).
 
   0.792
dppC-5
ABC transporter, membrane spanning protein (dipeptide).
 
   0.791
Atu3267
ABC transporter, membrane spanning protein (dipeptide).
 
   0.790
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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