Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Atu1256Cytochrome P450 hydroxylase. (415 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.782
Atu3682
Non-ribosomal peptide synthetase, siderophore biosynthesis protein.
 
 0.718
Atu1257
GGDEF family protein.
       0.706
Atu3675
Peptide synthetase, siderophore biosynthesis protein.
  
 
 0.687
Atu0727
Ferredoxin I.
  
 0.666
Atu1196
Naphthalene 1,2-dioxygenase.
 
 0.658
Atu3673
Siderophore biosynthesis protein.
  
 0.655
Atu3672
Polyketide synthase, siderophore biosynthesis protein.
 
 0.643
Atu3683
Peptide synthetase, siderophore biosynthesis protein.
 
 
 0.586
fdx
Ferrodoxin.
  
 0.487
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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