Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
acd-3acyl-CoA dehydrogenase. (520 aa)    
Predicted Functional Partners:
fadB-2
enoyl-CoA hydratase.
 
 0.963
fad
enoyl-CoA hydratase.
 
 0.952
etfA
Electron transfer flavoprotein alpha subunit.
 
 
 0.947
Atu1416
long-chain-fatty-acid-CoA-ligase.
  
 
 0.908
etfB
Electron transfer flavoprotein beta subunit.
 
 
 0.878
Atu1415
3-hydroxyacyl-CoA dehydrogenase type II; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.876
Atu0733
enoyl-CoA hydratase/isomerase.
 
 0.872
Atu3481
Enoyl-CoA hydratase/isomerase family protein.
 
 0.863
fadB
Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.825
Atu3505
enoyl-CoA hydratase.
 
 0.798
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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