Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Atu1491Sodium bile acid symporter family protein. (352 aa)    
Predicted Functional Partners:
arsC
Arsenate reductase.
     
 0.929
arsH
Arsenical resistance protein.
     
 0.916
Atu1492
Transcriptional regulator, ArsR family.
 
  
 0.886
Atu0535
Conserved hypothetical protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.593
Atu2677
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.593
pit
Phosphate permease.
     
 0.533
tnp
IS30 family transposase.
       0.447
Atu2124
Transcriptional regulator, ArsR family.
 
  
 0.441
Atu0843
P type cation (metal) transporter, ATPase component.
  
  
 0.440
Atu0937
Copper transporting ATPase.
  
  
 0.440
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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