Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu1531 | Atu1532 | Atu1531 | Atu1532 | Conserved hypothetical protein. | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein. | 0.785 |
Atu1531 | fixG | Atu1531 | Atu1530 | Conserved hypothetical protein. | Nitrogen fixation protein FixG. | 0.570 |
Atu1531 | fixH | Atu1531 | Atu1529 | Conserved hypothetical protein. | Nitrogen fixation protein FixH. | 0.583 |
Atu1531 | fixI | Atu1531 | Atu1528 | Conserved hypothetical protein. | Nitrogen fixation protein FixI. | 0.569 |
Atu1531 | fixS | Atu1531 | Atu1527 | Conserved hypothetical protein. | Nitrogen fixation protein FixS. | 0.548 |
Atu1532 | Atu1531 | Atu1532 | Atu1531 | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein. | Conserved hypothetical protein. | 0.785 |
Atu1532 | fixG | Atu1532 | Atu1530 | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein. | Nitrogen fixation protein FixG. | 0.550 |
Atu1532 | fixH | Atu1532 | Atu1529 | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein. | Nitrogen fixation protein FixH. | 0.570 |
Atu1532 | fixI | Atu1532 | Atu1528 | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein. | Nitrogen fixation protein FixI. | 0.548 |
Atu1532 | fixS | Atu1532 | Atu1527 | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein. | Nitrogen fixation protein FixS. | 0.523 |
fixG | Atu1531 | Atu1530 | Atu1531 | Nitrogen fixation protein FixG. | Conserved hypothetical protein. | 0.570 |
fixG | Atu1532 | Atu1530 | Atu1532 | Nitrogen fixation protein FixG. | Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein. | 0.550 |
fixG | fixH | Atu1530 | Atu1529 | Nitrogen fixation protein FixG. | Nitrogen fixation protein FixH. | 0.991 |
fixG | fixI | Atu1530 | Atu1528 | Nitrogen fixation protein FixG. | Nitrogen fixation protein FixI. | 0.939 |
fixG | fixN | Atu1530 | Atu1537 | Nitrogen fixation protein FixG. | Cytochrome-c oxidase, FixN chain; Belongs to the heme-copper respiratory oxidase family. | 0.969 |
fixG | fixO | Atu1530 | Atu1536 | Nitrogen fixation protein FixG. | Cytochrome C oxidase, FixO chain. | 0.991 |
fixG | fixP | Atu1530 | Atu1534 | Nitrogen fixation protein FixG. | Cytochrome-c oxidase, FixP chain; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.989 |
fixG | fixQ | Atu1530 | Atu1535 | Nitrogen fixation protein FixG. | Cytochrome c oxidase, FixQ chain. | 0.958 |
fixG | fixS | Atu1530 | Atu1527 | Nitrogen fixation protein FixG. | Nitrogen fixation protein FixS. | 0.957 |
fixG | gntZ | Atu1530 | Atu1526 | Nitrogen fixation protein FixG. | 6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.544 |
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