Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Atu3766 | pabB | Atu3766 | Atu1676 | Conserved hypothetical protein. | Para-aminobenzoate synthase component I. | 0.997 |
| Atu3766 | trpE(G) | Atu3766 | Atu2289 | Conserved hypothetical protein. | Anthranilate synthase component I and II. | 0.589 |
| Atu3917 | aroC | Atu3917 | Atu0754 | Conserved hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.616 |
| Atu3917 | pabB | Atu3917 | Atu1676 | Conserved hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Para-aminobenzoate synthase component I. | 0.901 |
| Atu3917 | trpA | Atu3917 | Atu0019 | Conserved hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Tryptophan synthase alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.861 |
| Atu3917 | trpB | Atu3917 | Atu0018 | Conserved hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Tryptophan synthase beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.845 |
| Atu3917 | trpC | Atu3917 | Atu1688 | Conserved hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Indole-3-glycerol-phosphate synthase; Belongs to the TrpC family. | 0.862 |
| Atu3917 | trpE(G) | Atu3917 | Atu2289 | Conserved hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Anthranilate synthase component I and II. | 0.998 |
| Atu3917 | trpF | Atu3917 | Atu0017 | Conserved hypothetical protein; Belongs to the LysR transcriptional regulatory family. | N-(5-phosphoribosyl) anthranilate isomerase; Belongs to the TrpF family. | 0.862 |
| Atu3917 | tyrA | Atu3917 | Atu2698 | Conserved hypothetical protein; Belongs to the LysR transcriptional regulatory family. | Chorismate mutase. | 0.451 |
| aroC | Atu3917 | Atu0754 | Atu3917 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Conserved hypothetical protein; Belongs to the LysR transcriptional regulatory family. | 0.616 |
| aroC | pabB | Atu0754 | Atu1676 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Para-aminobenzoate synthase component I. | 0.946 |
| aroC | trpA | Atu0754 | Atu0019 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.829 |
| aroC | trpB | Atu0754 | Atu0018 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.731 |
| aroC | trpC | Atu0754 | Atu1688 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Indole-3-glycerol-phosphate synthase; Belongs to the TrpC family. | 0.607 |
| aroC | trpD | Atu0754 | Atu1687 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.691 |
| aroC | trpE(G) | Atu0754 | Atu2289 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate synthase component I and II. | 0.972 |
| aroC | trpF | Atu0754 | Atu0017 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | N-(5-phosphoribosyl) anthranilate isomerase; Belongs to the TrpF family. | 0.487 |
| aroC | tyrA | Atu0754 | Atu2698 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Chorismate mutase. | 0.979 |
| pabB | Atu3766 | Atu1676 | Atu3766 | Para-aminobenzoate synthase component I. | Conserved hypothetical protein. | 0.997 |
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