Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Atu1880ABC transporter, membrane spanning protein (amino acid). (267 aa)    
Predicted Functional Partners:
Atu1881
ABC transporter, membrane spanning protein (amino acid).
 
 
0.993
Atu1879
ABC transporter, substrate binding protein (amino acid); Belongs to the bacterial solute-binding protein 3 family.
 
 0.924
nocP1
ABC transporter, nucleotide binding/ATPase protein.
 
  
 0.869
Atu2365
ABC transporter, substrate binding protein (amino acid).
 
 
 0.791
Atu0479
ABC transporter, substrate binding protein (amino acid).
 
 
 0.764
Atu4283
ABC transporter, nucleotide binding/ATPase protein.
 
    0.737
Atu4752
ABC transporter, nucleotide binding/ATPase protein (amino acid).
 
    0.729
Atu3360
ABC transporter, nucleotide binding/ATPase protein (amino acid).
 
    0.727
Atu4235
ABC transporter, nucleotide binding/ATPase protein (amino acid).
 
    0.720
Atu4284
ABC transporter, substrate binding protein (amino acid); Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.720
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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