Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
carA | glmS | Atu2170 | Atu1786 | Carbamoylphosphate synthase small chain; Belongs to the CarA family. | Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.934 |
carA | glnA | Atu2170 | Atu0193 | Carbamoylphosphate synthase small chain; Belongs to the CarA family. | Glutamine synthetase. | 0.924 |
carA | glnA-2 | Atu2170 | Atu0602 | Carbamoylphosphate synthase small chain; Belongs to the CarA family. | Glutamine synthetase. | 0.913 |
carA | glnA-3 | Atu2170 | Atu1770 | Carbamoylphosphate synthase small chain; Belongs to the CarA family. | Glutamine synthetase. | 0.929 |
carA | glnA-4 | Atu2170 | Atu2142 | Carbamoylphosphate synthase small chain; Belongs to the CarA family. | Glutamine synthetase. | 0.913 |
carA | gltB | Atu2170 | Atu0145 | Carbamoylphosphate synthase small chain; Belongs to the CarA family. | Glutamate synthase large subunit. | 0.918 |
carA | gltB-2 | Atu2170 | Atu3784 | Carbamoylphosphate synthase small chain; Belongs to the CarA family. | Glutamate synthase large subunit. | 0.918 |
carA | gltD | Atu2170 | Atu3783 | Carbamoylphosphate synthase small chain; Belongs to the CarA family. | Glutamate synthase, small subunit. | 0.910 |
glmS | carA | Atu1786 | Atu2170 | Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Carbamoylphosphate synthase small chain; Belongs to the CarA family. | 0.934 |
glmS | glnA | Atu1786 | Atu0193 | Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamine synthetase. | 0.927 |
glmS | glnA-2 | Atu1786 | Atu0602 | Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamine synthetase. | 0.918 |
glmS | glnA-3 | Atu1786 | Atu1770 | Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamine synthetase. | 0.918 |
glmS | glnA-4 | Atu1786 | Atu2142 | Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamine synthetase. | 0.918 |
glmS | gltB | Atu1786 | Atu0145 | Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamate synthase large subunit. | 0.955 |
glmS | gltB-2 | Atu1786 | Atu3784 | Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamate synthase large subunit. | 0.955 |
glmS | gltD | Atu1786 | Atu3783 | Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamate synthase, small subunit. | 0.922 |
glnA | carA | Atu0193 | Atu2170 | Glutamine synthetase. | Carbamoylphosphate synthase small chain; Belongs to the CarA family. | 0.924 |
glnA | glmS | Atu0193 | Atu1786 | Glutamine synthetase. | Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.927 |
glnA | glnA-2 | Atu0193 | Atu0602 | Glutamine synthetase. | Glutamine synthetase. | 0.922 |
glnA | glnA-3 | Atu0193 | Atu1770 | Glutamine synthetase. | Glutamine synthetase. | 0.921 |
page 1 of 5