Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu1435 | Atu2203 | Atu1435 | Atu2203 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.603 |
Atu1634 | Atu2203 | Atu1634 | Atu2203 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.557 |
Atu2201 | Atu2203 | Atu2201 | Atu2203 | Hydrolase. | Conserved hypothetical protein. | 0.507 |
Atu2201 | Atu2204 | Atu2201 | Atu2204 | Hydrolase. | Hypothetical protein. | 0.436 |
Atu2201 | petP | Atu2201 | Atu2205 | Hydrolase. | Transcriptional regulator, MarR family. | 0.414 |
Atu2201 | petR | Atu2201 | Atu2206 | Hydrolase. | Two component response regulator. | 0.404 |
Atu2203 | Atu1435 | Atu2203 | Atu1435 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.603 |
Atu2203 | Atu1634 | Atu2203 | Atu1634 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.557 |
Atu2203 | Atu2201 | Atu2203 | Atu2201 | Conserved hypothetical protein. | Hydrolase. | 0.507 |
Atu2203 | Atu2204 | Atu2203 | Atu2204 | Conserved hypothetical protein. | Hypothetical protein. | 0.709 |
Atu2203 | Atu4095 | Atu2203 | Atu4095 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.531 |
Atu2203 | Atu4492 | Atu2203 | Atu4492 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.526 |
Atu2203 | cgpA | Atu2203 | Atu0383 | Conserved hypothetical protein. | GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.649 |
Atu2203 | envZ | Atu2203 | Atu2207 | Conserved hypothetical protein. | Two component sensor kinase. | 0.545 |
Atu2203 | petP | Atu2203 | Atu2205 | Conserved hypothetical protein. | Transcriptional regulator, MarR family. | 0.646 |
Atu2203 | petR | Atu2203 | Atu2206 | Conserved hypothetical protein. | Two component response regulator. | 0.635 |
Atu2204 | Atu2201 | Atu2204 | Atu2201 | Hypothetical protein. | Hydrolase. | 0.436 |
Atu2204 | Atu2203 | Atu2204 | Atu2203 | Hypothetical protein. | Conserved hypothetical protein. | 0.709 |
Atu2204 | envZ | Atu2204 | Atu2207 | Hypothetical protein. | Two component sensor kinase. | 0.579 |
Atu2204 | petP | Atu2204 | Atu2205 | Hypothetical protein. | Transcriptional regulator, MarR family. | 0.668 |
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