Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
exoQ-2Exopolysaccharide production protein. (477 aa)    
Predicted Functional Partners:
exoL
Succinoglycan biosynthesis protein.
 
  
 0.832
exoH
Succinoglycan biosynthesis protein.
 
   
 0.818
exoM
UDP-hexose transferase.
 
  
 0.807
exoF
Exopolysaccharide production protein.
 
  
 0.791
exoT
Succinoglycan biosynthesis transport protein.
 
  
 0.783
exoM-2
UDP-hexose transferase.
 
   
 0.779
exoK
Endo-1,3-1,4-beta-glycanase.
 
   
 0.768
exoQ-3
Exopolysaccharide production protein.
  
     0.757
Atu0480
Polysaccharide biosynthesis protein.
 
  
 0.750
Atu1236
Polysaccharide biosynthesis glycosyltransferase.
 
  
 0.737
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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