Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Atu2402Urease accessory protein. (209 aa)    
Predicted Functional Partners:
ureC
Urease alpha subunit; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
       0.861
Atu2400
Conserved hypothetical protein.
       0.803
Atu2403
Conserved hypothetical protein.
       0.766
ureB
Urease beta subunit; Belongs to the urease beta subunit family.
       0.766
Atu2404
Conserved hypothetical protein.
       0.718
Atu2406
Conserved hypothetical protein.
       0.660
ureA
Urease gamma subunit; Belongs to the urease gamma subunit family.
       0.660
Atu1236
Polysaccharide biosynthesis glycosyltransferase.
  
  
 0.561
Atu3728
Conserved hypothetical protein.
   
    0.482
ureD
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
       0.475
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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