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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atu2414ABC transporter, substrate binding protein (urea/amide). (429 aa)    
Predicted Functional Partners:
Atu2412
ABC transporter, membrane spanning protein (urea/amide); Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.986
Atu2413
ABC transporter, membrane spanning protein (urea/amide); Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.985
Atu2411
ABC transporter, nucleotide binding/ATPase protein (urea/amide).
 
  
 0.980
Atu2410
ABC transporter, nucleotide binding/ATPase protein (urea/amide).
 
 
 0.975
Atu1411
ABC transporter, nucleotide binding/ATPase protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.826
ureE
Urease accessory protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
   
 0.723
nasT
Two component response regulator.
 
 
 0.694
livH-2
ABC transporter, membrane spanning protein (branched chain amino acid); Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.658
ureD
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
   
 0.641
livM
ABC transporter, membrane spanning protein (branched chain amino acid); Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.637
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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