Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hmuUABC transporter, membrane spanning protein (hemin); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (362 aa)    
Predicted Functional Partners:
hmuT
ABC transporter, substrate binding protein (hemin).
 
 0.998
hmuV
ABC transporter, nucleotide binding/ATPase protein (hemin); Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.988
fecE-2
ABC transporter, nucleotide binding/ATPase protein (iron).
 
 
 0.893
fecE-3
ABC transporter, nucleotide binding/ATPase protein (iron (III) dicitrate).
 
 
 0.893
fhuC
ABC transporter, nucleotide binding/ATPase protein (ferrichrome).
 
 
 0.892
fecE
ABC transporter, nucleotide binding/ATPase protein (iron).
 
 
 0.798
Atu2461
Conserved hypothetical protein.
 
   
 0.653
Atu2462
Conserved hypothetical protein.
     
 0.582
Atu3390
ABC transporter, substrate binding protein (iron).
 
 
 0.576
Atu3391
ABC transporter, substrate binding protein (iron).
 
 
 0.569
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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