Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Atu2473ABC transporter, substrate binding protein. (312 aa)    
Predicted Functional Partners:
Atu2476
ABC transporter, nucleotide binding/ATPase protein.
 
  
 0.994
Atu2474
ABC transporter, membrane spanning protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.989
Atu2475
ABC transporter, membrane spanning protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.989
fecB
ABC transporter, membrane spanning protein (iron(III) dicitrate).
 
  
 0.691
fecE-3
ABC transporter, nucleotide binding/ATPase protein (iron (III) dicitrate).
 
  
 0.596
irr
Transcriptional regulator, Fur family; Belongs to the Fur family.
      
 0.512
Atu2454
Iron-chelator utilization protein.
 
  
 0.508
Atu2472
Hypothetical protein.
       0.504
fbpA1
ABC transporter, nucleotide binding/ATPase protein; Belongs to the ABC transporter superfamily.
      
 0.471
fbpA3
ABC transporter, membrane spanning protein.
      
 0.460
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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