Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Atu0843 | Atu0937 | Atu0843 | Atu0937 | P type cation (metal) transporter, ATPase component. | Copper transporting ATPase. | 0.988 |
| Atu0843 | Atu1480 | Atu0843 | Atu1480 | P type cation (metal) transporter, ATPase component. | Conserved hypothetical protein. | 0.462 |
| Atu0843 | dps | Atu0843 | Atu2477 | P type cation (metal) transporter, ATPase component. | DNA oxidation protective protein, not DNA-binding; Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. It efficiently inhibits hydroxyl radical production by the Fenton reaction. Does not bind DNA. | 0.549 |
| Atu0937 | Atu0843 | Atu0937 | Atu0843 | Copper transporting ATPase. | P type cation (metal) transporter, ATPase component. | 0.988 |
| Atu0937 | Atu1480 | Atu0937 | Atu1480 | Copper transporting ATPase. | Conserved hypothetical protein. | 0.462 |
| Atu0937 | dps | Atu0937 | Atu2477 | Copper transporting ATPase. | DNA oxidation protective protein, not DNA-binding; Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. It efficiently inhibits hydroxyl radical production by the Fenton reaction. Does not bind DNA. | 0.549 |
| Atu1013 | bfr | Atu1013 | Atu2771 | Ferredoxin reductase. | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.475 |
| Atu1013 | dps | Atu1013 | Atu2477 | Ferredoxin reductase. | DNA oxidation protective protein, not DNA-binding; Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. It efficiently inhibits hydroxyl radical production by the Fenton reaction. Does not bind DNA. | 0.531 |
| Atu1480 | Atu0843 | Atu1480 | Atu0843 | Conserved hypothetical protein. | P type cation (metal) transporter, ATPase component. | 0.462 |
| Atu1480 | Atu0937 | Atu1480 | Atu0937 | Conserved hypothetical protein. | Copper transporting ATPase. | 0.462 |
| Atu1480 | dps | Atu1480 | Atu2477 | Conserved hypothetical protein. | DNA oxidation protective protein, not DNA-binding; Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. It efficiently inhibits hydroxyl radical production by the Fenton reaction. Does not bind DNA. | 0.620 |
| Atu2475 | dps | Atu2475 | Atu2477 | ABC transporter, membrane spanning protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | DNA oxidation protective protein, not DNA-binding; Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. It efficiently inhibits hydroxyl radical production by the Fenton reaction. Does not bind DNA. | 0.508 |
| Atu2478 | dps | Atu2478 | Atu2477 | Hypothetical protein. | DNA oxidation protective protein, not DNA-binding; Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. It efficiently inhibits hydroxyl radical production by the Fenton reaction. Does not bind DNA. | 0.604 |
| bfr | Atu1013 | Atu2771 | Atu1013 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Ferredoxin reductase. | 0.475 |
| bfr | dps | Atu2771 | Atu2477 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | DNA oxidation protective protein, not DNA-binding; Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. It efficiently inhibits hydroxyl radical production by the Fenton reaction. Does not bind DNA. | 0.708 |
| clpS | dps | Atu1363 | Atu2477 | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | DNA oxidation protective protein, not DNA-binding; Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. It efficiently inhibits hydroxyl radical production by the Fenton reaction. Does not bind DNA. | 0.673 |
| clpS-2 | dps | Atu2232 | Atu2477 | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | DNA oxidation protective protein, not DNA-binding; Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. It efficiently inhibits hydroxyl radical production by the Fenton reaction. Does not bind DNA. | 0.673 |
| dps | Atu0843 | Atu2477 | Atu0843 | DNA oxidation protective protein, not DNA-binding; Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. It efficiently inhibits hydroxyl radical production by the Fenton reaction. Does not bind DNA. | P type cation (metal) transporter, ATPase component. | 0.549 |
| dps | Atu0937 | Atu2477 | Atu0937 | DNA oxidation protective protein, not DNA-binding; Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. It efficiently inhibits hydroxyl radical production by the Fenton reaction. Does not bind DNA. | Copper transporting ATPase. | 0.549 |
| dps | Atu1013 | Atu2477 | Atu1013 | DNA oxidation protective protein, not DNA-binding; Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. It efficiently inhibits hydroxyl radical production by the Fenton reaction. Does not bind DNA. | Ferredoxin reductase. | 0.531 |
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