STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malEABC transporter, substrate binding protein (maltose). (410 aa)    
Predicted Functional Partners:
malG
ABC transporter, membrane spanning protein (maltose).
 
  0.994
malF
ABC transporter, membrane spanning protein (maltose).
 
  0.994
Atu2604
Oxidoreductase.
 
     0.913
malF-2
ABC transporter, membrane spanning protein (sugar).
  
 
 0.699
Atu2594
MFS permease.
  
     0.685
Atu3173
ABC transporter, membrane spanning protein (sugar).
  
   0.673
malK
ABC transporter, nucleotide binding/ATPase protein (maltose/maltodextrin).
  
   0.666
thuF-2
ABC transporter, membrane spanning protein (sugar).
  
   0.653
Atu3100
ABC transporter, membrane spanning protein (sugar).
  
   0.646
Atu3101
ABC transporter, membrane spanning protein (sugar).
  
   0.625
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.