Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu0318 | Atu1256 | Atu0318 | Atu1256 | Conserved hypothetical protein. | Cytochrome P450 hydroxylase. | 0.458 |
Atu0318 | Atu2610 | Atu0318 | Atu2610 | Conserved hypothetical protein. | FAD-dependent monooxygenase. | 0.443 |
Atu0318 | Atu3672 | Atu0318 | Atu3672 | Conserved hypothetical protein. | Polyketide synthase, siderophore biosynthesis protein. | 0.430 |
Atu0318 | cyc | Atu0318 | Atu1569 | Conserved hypothetical protein. | Cytochrome P450. | 0.562 |
Atu1256 | Atu0318 | Atu1256 | Atu0318 | Cytochrome P450 hydroxylase. | Conserved hypothetical protein. | 0.458 |
Atu1256 | Atu2610 | Atu1256 | Atu2610 | Cytochrome P450 hydroxylase. | FAD-dependent monooxygenase. | 0.425 |
Atu1256 | Atu2611 | Atu1256 | Atu2611 | Cytochrome P450 hydroxylase. | Conserved hypothetical protein. | 0.519 |
Atu1256 | Atu3672 | Atu1256 | Atu3672 | Cytochrome P450 hydroxylase. | Polyketide synthase, siderophore biosynthesis protein. | 0.869 |
Atu1256 | Atu3675 | Atu1256 | Atu3675 | Cytochrome P450 hydroxylase. | Peptide synthetase, siderophore biosynthesis protein. | 0.793 |
Atu1256 | Atu3682 | Atu1256 | Atu3682 | Cytochrome P450 hydroxylase. | Non-ribosomal peptide synthetase, siderophore biosynthesis protein. | 0.969 |
Atu1256 | Atu3683 | Atu1256 | Atu3683 | Cytochrome P450 hydroxylase. | Peptide synthetase, siderophore biosynthesis protein. | 0.730 |
Atu2610 | Atu0318 | Atu2610 | Atu0318 | FAD-dependent monooxygenase. | Conserved hypothetical protein. | 0.443 |
Atu2610 | Atu1256 | Atu2610 | Atu1256 | FAD-dependent monooxygenase. | Cytochrome P450 hydroxylase. | 0.425 |
Atu2610 | Atu2611 | Atu2610 | Atu2611 | FAD-dependent monooxygenase. | Conserved hypothetical protein. | 0.768 |
Atu2610 | Atu3672 | Atu2610 | Atu3672 | FAD-dependent monooxygenase. | Polyketide synthase, siderophore biosynthesis protein. | 0.454 |
Atu2610 | Atu3675 | Atu2610 | Atu3675 | FAD-dependent monooxygenase. | Peptide synthetase, siderophore biosynthesis protein. | 0.489 |
Atu2610 | Atu3682 | Atu2610 | Atu3682 | FAD-dependent monooxygenase. | Non-ribosomal peptide synthetase, siderophore biosynthesis protein. | 0.450 |
Atu2610 | Atu3683 | Atu2610 | Atu3683 | FAD-dependent monooxygenase. | Peptide synthetase, siderophore biosynthesis protein. | 0.420 |
Atu2610 | cyc | Atu2610 | Atu1569 | FAD-dependent monooxygenase. | Cytochrome P450. | 0.498 |
Atu2610 | dxr | Atu2610 | Atu2612 | FAD-dependent monooxygenase. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.584 |
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