Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu2675 | Atu2676 | Atu2675 | Atu2676 | Conserved hypothetical protein. | 4a-hydroxytetrahydrobiopterin dehydratase. | 0.668 |
Atu2675 | Atu2677 | Atu2675 | Atu2677 | Conserved hypothetical protein. | Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.528 |
Atu2675 | Atu8182 | Atu2675 | Atu8182 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.555 |
Atu2676 | Atu2675 | Atu2676 | Atu2675 | 4a-hydroxytetrahydrobiopterin dehydratase. | Conserved hypothetical protein. | 0.668 |
Atu2676 | Atu2677 | Atu2676 | Atu2677 | 4a-hydroxytetrahydrobiopterin dehydratase. | Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.682 |
Atu2676 | Atu4529 | Atu2676 | Atu4529 | 4a-hydroxytetrahydrobiopterin dehydratase. | Conserved hypothetical protein. | 0.612 |
Atu2676 | Atu8182 | Atu2676 | Atu8182 | 4a-hydroxytetrahydrobiopterin dehydratase. | Conserved hypothetical protein. | 0.430 |
Atu2676 | gph | Atu2676 | Atu1614 | 4a-hydroxytetrahydrobiopterin dehydratase. | Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.405 |
Atu2677 | Atu2675 | Atu2677 | Atu2675 | Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Conserved hypothetical protein. | 0.528 |
Atu2677 | Atu2676 | Atu2677 | Atu2676 | Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 4a-hydroxytetrahydrobiopterin dehydratase. | 0.682 |
Atu4529 | Atu2676 | Atu4529 | Atu2676 | Conserved hypothetical protein. | 4a-hydroxytetrahydrobiopterin dehydratase. | 0.612 |
Atu8182 | Atu2675 | Atu8182 | Atu2675 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.555 |
Atu8182 | Atu2676 | Atu8182 | Atu2676 | Conserved hypothetical protein. | 4a-hydroxytetrahydrobiopterin dehydratase. | 0.430 |
gph | Atu2676 | Atu1614 | Atu2676 | Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 4a-hydroxytetrahydrobiopterin dehydratase. | 0.405 |