Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
Atu2744C4-dicarboxylate binding protein. (335 aa)    
Predicted Functional Partners:
Atu2742
Conserved hypothetical protein.
 
  
 0.968
Atu2743
Conserved hypothetical protein.
  
 0.968
Atu3261
ABC transporter, membrane spanning protein.
 
  
 0.895
Atu4827
ABC transporter, membrane spanning protein.
 
  
 0.891
Atu3135
ABC transporter, membrane spanning protein.
  
 0.829
Atu3156
ABC transporter, membrane spanning protein.
  
 0.821
Atu3255
ABC transporter, membrane spanning protein (dicarboxylate).
  
 0.818
Atu3136
ABC transporter, membrane spanning protein.
 
  
 0.789
Atu3157
ABC transporter, membrane spanning protein.
 
  
 0.635
Atu2741
Conserved hypothetical protein.
       0.601
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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