Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu2811 | Atu2812 | Atu2811 | Atu2812 | Conserved hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Conserved hypothetical protein. | 0.632 |
Atu2811 | Atu2814 | Atu2811 | Atu2814 | Conserved hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Zinc-binding dehydrogenase. | 0.593 |
Atu2811 | Atu2815 | Atu2811 | Atu2815 | Conserved hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Conserved hypothetical protein. | 0.984 |
Atu2811 | Atu2816 | Atu2811 | Atu2816 | Conserved hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Oxidoreductase. | 0.725 |
Atu2811 | uxaB | Atu2811 | Atu2813 | Conserved hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Altronate oxidoreductase. | 0.566 |
Atu2812 | Atu2811 | Atu2812 | Atu2811 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.632 |
Atu2812 | Atu2814 | Atu2812 | Atu2814 | Conserved hypothetical protein. | Zinc-binding dehydrogenase. | 0.772 |
Atu2812 | Atu2815 | Atu2812 | Atu2815 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.940 |
Atu2812 | Atu2816 | Atu2812 | Atu2816 | Conserved hypothetical protein. | Oxidoreductase. | 0.864 |
Atu2812 | rbsA-2 | Atu2812 | Atu2819 | Conserved hypothetical protein. | ABC transporter, nucleotide binding/ATPase protein (ribose); Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family. | 0.410 |
Atu2812 | rbsB-2 | Atu2812 | Atu2817 | Conserved hypothetical protein. | ABC transporter, substrate binding protein (ribose). | 0.625 |
Atu2812 | rbsC-2 | Atu2812 | Atu2818 | Conserved hypothetical protein. | ABC transporter, membrane spanning protein (ribose); Belongs to the binding-protein-dependent transport system permease family. | 0.407 |
Atu2812 | uxaB | Atu2812 | Atu2813 | Conserved hypothetical protein. | Altronate oxidoreductase. | 0.808 |
Atu2814 | Atu2811 | Atu2814 | Atu2811 | Zinc-binding dehydrogenase. | Conserved hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.593 |
Atu2814 | Atu2812 | Atu2814 | Atu2812 | Zinc-binding dehydrogenase. | Conserved hypothetical protein. | 0.772 |
Atu2814 | Atu2815 | Atu2814 | Atu2815 | Zinc-binding dehydrogenase. | Conserved hypothetical protein. | 0.871 |
Atu2814 | Atu2816 | Atu2814 | Atu2816 | Zinc-binding dehydrogenase. | Oxidoreductase. | 0.819 |
Atu2814 | rbsA-2 | Atu2814 | Atu2819 | Zinc-binding dehydrogenase. | ABC transporter, nucleotide binding/ATPase protein (ribose); Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Carbohydrate importer 2 (CUT2) (TC 3.A.1.2) family. | 0.420 |
Atu2814 | rbsB-2 | Atu2814 | Atu2817 | Zinc-binding dehydrogenase. | ABC transporter, substrate binding protein (ribose). | 0.609 |
Atu2814 | rbsC-2 | Atu2814 | Atu2818 | Zinc-binding dehydrogenase. | ABC transporter, membrane spanning protein (ribose); Belongs to the binding-protein-dependent transport system permease family. | 0.443 |
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