Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Atu3053ABC transporter, nucleotide binding/ATPase protein (peptide); Belongs to the ABC transporter superfamily. (548 aa)    
Predicted Functional Partners:
Atu0750
ABC transporter, membrane spanning protein.
  
 
 0.607
Atu3047
ABC transporter, membrane spanning protein (oligopeptide).
 
   0.596
Atu3048
ABC transporter, membrane spanning protein (oligopeptide).
 
   0.545
Atu3214
ABC transporter, membrane spanning protein (oligopeptide).
 
   0.523
Atu3435
ABC transporter, membrane spanning protein (oligopeptide).
 
   0.514
Atu3052
Transcriptional regulator, MarR family.
 
    0.498
Atu3378
ABC transporter, membrane spanning protein (oligopeptide).
 
   0.486
Atu3049
ABC transporter, substrate binding protein (oligopeptide).
 
   0.480
Atu3411
ABC transporter, membrane spanning protein.
 
   0.462
Atu1774
ABC transporter, substrate binding protein (peptide).
 
 
 0.453
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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