Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Atu3088ABC transporter, substrate binding protein (spermidine/putrescine). (429 aa)    
Predicted Functional Partners:
Atu3089
ABC transporter, nucleotide binding/ATPase protein (spermidine/putrescine); Belongs to the ABC transporter superfamily.
 
 0.994
Atu3086
ABC transporter, membrane spanning protein (spermidine/putrescine).
 
 
 0.957
Atu3087
ABC transporter, membrane spanning protein (spermidine/putrescine).
 
  
 0.929
hyuA2
Hydantoin Racemase.
 
     0.753
Atu4423
ABC transporter, membrane spanning protein.
 
 
 0.751
Atu0612
ABC transporter, membrane spanning protein.
  
 
 0.699
Atu2149
ABC transporter, membrane spanning protein.
  
 
 0.687
Atu4245
ABC transporter, membrane spanning protein (polyamine).
  
 
 0.641
Atu4571
ABC transporter, membrane spanning protein.
  
 
 0.631
Atu4422
ABC transporter, membrane spanning protein (spermidine/putrescine).
 
  
 0.583
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.