Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Atu3089ABC transporter, nucleotide binding/ATPase protein (spermidine/putrescine); Belongs to the ABC transporter superfamily. (361 aa)    
Predicted Functional Partners:
Atu3088
ABC transporter, substrate binding protein (spermidine/putrescine).
 
 0.994
Atu3086
ABC transporter, membrane spanning protein (spermidine/putrescine).
 
 
 0.922
Atu3087
ABC transporter, membrane spanning protein (spermidine/putrescine).
 
 
 0.920
Atu4423
ABC transporter, membrane spanning protein.
 
 
 0.840
Atu4422
ABC transporter, membrane spanning protein (spermidine/putrescine).
 
 
 0.833
Atu4571
ABC transporter, membrane spanning protein.
 
 
 0.806
Atu4570
ABC transporter, membrane spanning protein.
 
 
 0.787
Atu4244
ABC transporter, membrane spanning protein (polyamine).
 
 
 0.777
Atu0612
ABC transporter, membrane spanning protein.
 
 
 0.739
potB
ABC transporter, membrane spanning protein.
 
 
 0.729
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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