STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atu3232Hydroxypyruvate reductase. (426 aa)    
Predicted Functional Partners:
Atu0077
D-isomer specific 2-hydroxyacid dehydrogenases family protein.
 
 0.944
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
    
 0.934
Atu2737
Oxidoredutase.
 
  
 0.921
garR
2-hydroxy-3-oxopropionate reductase.
 
  
 0.920
Atu3399
2-hydroxyacid dehydrogenase.
    
 0.905
Atu4048
2-hydroxyacid dehydrogenase.
    
 0.905
Atu3401
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.903
pgm
2,3-Bisphosphoglycerate-Independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
  0.903
Atu3950
Aldehyde dehydrogenase.
   
 
 0.903
Atu4153
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.903
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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