Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Atu3389ABC transporter, membrane spanning protein (iron); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (355 aa)    
Predicted Functional Partners:
Atu3390
ABC transporter, substrate binding protein (iron).
 
 0.998
fecE
ABC transporter, nucleotide binding/ATPase protein (iron).
 
 
 0.987
Atu3391
ABC transporter, substrate binding protein (iron).
 
 
 0.934
hmuV
ABC transporter, nucleotide binding/ATPase protein (hemin); Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.912
fecE-2
ABC transporter, nucleotide binding/ATPase protein (iron).
 
 
 0.894
fhuC
ABC transporter, nucleotide binding/ATPase protein (ferrichrome).
 
 
 0.886
fecE-3
ABC transporter, nucleotide binding/ATPase protein (iron (III) dicitrate).
 
 
 0.884
hmuT
ABC transporter, substrate binding protein (hemin).
 
 
 0.860
Atu3396
ABC transporter, substrate binding protein (iron).
 
 
 0.677
Atu3392
Methyltransferase.
 
     0.602
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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