Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Atu3391ABC transporter, substrate binding protein (iron). (377 aa)    
Predicted Functional Partners:
fecE
ABC transporter, nucleotide binding/ATPase protein (iron).
 
 
 0.952
Atu3389
ABC transporter, membrane spanning protein (iron); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.934
Atu3392
Methyltransferase.
 
 
   0.853
fecE-2
ABC transporter, nucleotide binding/ATPase protein (iron).
 
 
 0.671
fhuC
ABC transporter, nucleotide binding/ATPase protein (ferrichrome).
 
 
 0.642
Atu3395
ABC transporter, membrane spanning protein (iron (III)); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.610
fhuB
ABC transporter, membrane spanning protein (ferrichrome); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.587
fecE-3
ABC transporter, nucleotide binding/ATPase protein (iron (III) dicitrate).
  
 
 0.575
Atu3390
ABC transporter, substrate binding protein (iron).
 
    
0.572
hmuU
ABC transporter, membrane spanning protein (hemin); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.569
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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