Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu3279 | Atu3430 | Atu3279 | Atu3430 | Methanesulfonate sulfonatase. | Alkanesulfonate monooxygenase. | 0.924 |
Atu3279 | Atu3446 | Atu3279 | Atu3446 | Methanesulfonate sulfonatase. | Monooxygenase. | 0.927 |
Atu3279 | Atu4154 | Atu3279 | Atu4154 | Methanesulfonate sulfonatase. | ABC transporter, substrate binding protein (aliphatic sulfonate). | 0.944 |
Atu3279 | Atu4155 | Atu3279 | Atu4155 | Methanesulfonate sulfonatase. | ABC transporter, membrane spanning protein (aliphatic sulphonate). | 0.941 |
Atu3279 | cysH | Atu3279 | Atu0818 | Methanesulfonate sulfonatase. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.900 |
Atu3279 | cysI | Atu3279 | Atu1456 | Methanesulfonate sulfonatase. | Sulfite reductase (NADPH) hemoprotein beta-component. | 0.901 |
Atu3279 | cysJ | Atu3279 | Atu0146 | Methanesulfonate sulfonatase. | Sulfite reductase (NADPH) flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component. | 0.900 |
Atu3279 | ssuA | Atu3279 | Atu1884 | Methanesulfonate sulfonatase. | ABC transporter, substrate binding protein (aliphatic sulfonate). | 0.944 |
Atu3279 | ssuB1 | Atu3279 | Atu4156 | Methanesulfonate sulfonatase. | ABC transporter, nucleotide binding/ATPase protein (aliphatic sulfonate); Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.927 |
Atu3279 | ssuD | Atu3279 | Atu3426 | Methanesulfonate sulfonatase. | Putative sulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.929 |
Atu3430 | Atu3279 | Atu3430 | Atu3279 | Alkanesulfonate monooxygenase. | Methanesulfonate sulfonatase. | 0.924 |
Atu3430 | Atu3446 | Atu3430 | Atu3446 | Alkanesulfonate monooxygenase. | Monooxygenase. | 0.929 |
Atu3430 | Atu4154 | Atu3430 | Atu4154 | Alkanesulfonate monooxygenase. | ABC transporter, substrate binding protein (aliphatic sulfonate). | 0.970 |
Atu3430 | Atu4155 | Atu3430 | Atu4155 | Alkanesulfonate monooxygenase. | ABC transporter, membrane spanning protein (aliphatic sulphonate). | 0.963 |
Atu3430 | cysH | Atu3430 | Atu0818 | Alkanesulfonate monooxygenase. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.900 |
Atu3430 | cysI | Atu3430 | Atu1456 | Alkanesulfonate monooxygenase. | Sulfite reductase (NADPH) hemoprotein beta-component. | 0.901 |
Atu3430 | cysJ | Atu3430 | Atu0146 | Alkanesulfonate monooxygenase. | Sulfite reductase (NADPH) flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component. | 0.912 |
Atu3430 | ssuA | Atu3430 | Atu1884 | Alkanesulfonate monooxygenase. | ABC transporter, substrate binding protein (aliphatic sulfonate). | 0.969 |
Atu3430 | ssuB1 | Atu3430 | Atu4156 | Alkanesulfonate monooxygenase. | ABC transporter, nucleotide binding/ATPase protein (aliphatic sulfonate); Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.957 |
Atu3430 | ssuD | Atu3430 | Atu3426 | Alkanesulfonate monooxygenase. | Putative sulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.921 |
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