Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu3582 | Atu3585 | Atu3582 | Atu3585 | Hypothetical protein. | Glutathione S-transferase. | 0.417 |
Atu3582 | Atu8189 | Atu3582 | Atu8189 | Hypothetical protein. | Hypothetical protein. | 0.630 |
Atu3582 | gloA-2 | Atu3582 | Atu3579 | Hypothetical protein. | Lactoylglutathione lyase. | 0.531 |
Atu3582 | kptA | Atu3582 | Atu3583 | Hypothetical protein. | Conserved hypothetical protein; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.732 |
Atu3582 | mutA | Atu3582 | Atu3580 | Hypothetical protein. | methylmalonyl-CoA mutase. | 0.506 |
Atu3582 | pccA | Atu3582 | Atu3581 | Hypothetical protein. | Propionyl-coenzyme A carboxylase, alpha polypeptide. | 0.773 |
Atu3585 | Atu3582 | Atu3585 | Atu3582 | Glutathione S-transferase. | Hypothetical protein. | 0.417 |
Atu3585 | Atu8189 | Atu3585 | Atu8189 | Glutathione S-transferase. | Hypothetical protein. | 0.568 |
Atu3585 | kptA | Atu3585 | Atu3583 | Glutathione S-transferase. | Conserved hypothetical protein; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.436 |
Atu3585 | pccA | Atu3585 | Atu3581 | Glutathione S-transferase. | Propionyl-coenzyme A carboxylase, alpha polypeptide. | 0.417 |
Atu8189 | Atu3582 | Atu8189 | Atu3582 | Hypothetical protein. | Hypothetical protein. | 0.630 |
Atu8189 | Atu3585 | Atu8189 | Atu3585 | Hypothetical protein. | Glutathione S-transferase. | 0.568 |
Atu8189 | gloA-2 | Atu8189 | Atu3579 | Hypothetical protein. | Lactoylglutathione lyase. | 0.406 |
Atu8189 | kptA | Atu8189 | Atu3583 | Hypothetical protein. | Conserved hypothetical protein; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.664 |
Atu8189 | mutA | Atu8189 | Atu3580 | Hypothetical protein. | methylmalonyl-CoA mutase. | 0.551 |
Atu8189 | pccA | Atu8189 | Atu3581 | Hypothetical protein. | Propionyl-coenzyme A carboxylase, alpha polypeptide. | 0.656 |
gloA-2 | Atu3582 | Atu3579 | Atu3582 | Lactoylglutathione lyase. | Hypothetical protein. | 0.531 |
gloA-2 | Atu8189 | Atu3579 | Atu8189 | Lactoylglutathione lyase. | Hypothetical protein. | 0.406 |
gloA-2 | kptA | Atu3579 | Atu3583 | Lactoylglutathione lyase. | Conserved hypothetical protein; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.462 |
gloA-2 | mutA | Atu3579 | Atu3580 | Lactoylglutathione lyase. | methylmalonyl-CoA mutase. | 0.995 |
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