STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etfAElectron transfer flavoprotein alpha subunit. (309 aa)    
Predicted Functional Partners:
Atu0994
Electrotransfer ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.999
etfB
Electron transfer flavoprotein beta subunit.
 0.999
acd-3
acyl-CoA dehydrogenase.
 
 
 0.947
acd-7
acyl-CoA dehydrogenase.
 
 0.940
mmgC-2
acyl-CoA dehydrogenase.
 
 0.911
acd
acyl-CoA dehydrogenase.
 
 
 0.907
fadB-2
enoyl-CoA hydratase.
  
 
 0.897
acd-5
acyl-CoA dehydrogenase.
 
 
 0.896
pdhB
Pyruvate dehydrogenase beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.879
mmgC
acyl-CoA dehydrogenase.
 
 
 0.874
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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