STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etfAElectron transfer flavoprotein alpha subunit. (309 aa)    
Predicted Functional Partners:
Atu0994
Electrotransfer ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.999
etfB
Electron transfer flavoprotein beta subunit.
 0.999
mmgC-2
acyl-CoA dehydrogenase.
 
 0.918
acd-3
acyl-CoA dehydrogenase.
 
 0.916
acd-7
acyl-CoA dehydrogenase.
 
 0.902
pdhB
Pyruvate dehydrogenase beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.891
mmgC
acyl-CoA dehydrogenase.
 
 0.884
acd
acyl-CoA dehydrogenase.
 
 0.848
gcdH
glutaryl-CoA dehydrogenase.
 
 0.836
acd-5
acyl-CoA dehydrogenase.
 
 
 0.830
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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