Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Atu3681Polyketide synthetase, siderophore biosynthesis protein. (1477 aa)    
Predicted Functional Partners:
Atu3675
Peptide synthetase, siderophore biosynthesis protein.
  
 0.998
Atu3677
Polyketide synthase, siderophore biosynthesis protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 0.981
Atu3673
Siderophore biosynthesis protein.
 0.975
Atu3683
Peptide synthetase, siderophore biosynthesis protein.
  
0.961
Atu3685
Thioesterase, putative siderophore biosynthesis protein.
  
 0.955
Atu3682
Non-ribosomal peptide synthetase, siderophore biosynthesis protein.
  
0.954
Atu3670
Siderophore biosynthesis protein.
  
0.953
Atu3684
Siderophore biosynthesis protein.
  
0.919
qor
Quinone oxidoreductase.
 
 
 0.906
Atu3671
Siderophore biosynthesis protein.
     0.905
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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