Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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Atu3686Putative siderophore biosynthesis protein. (297 aa)    
Predicted Functional Partners:
Atu3682
Non-ribosomal peptide synthetase, siderophore biosynthesis protein.
 
  
 0.719
Atu3687
TonB-dependent receptor.
 
  
 0.688
Atu3685
Thioesterase, putative siderophore biosynthesis protein.
       0.684
Atu3683
Peptide synthetase, siderophore biosynthesis protein.
  
  
 0.680
Atu3684
Siderophore biosynthesis protein.
  
  
 0.678
tonB
tonB protein.
  
    0.672
tolA
Conserved hypothetical protein.
  
    0.672
Atu3681
Polyketide synthetase, siderophore biosynthesis protein.
     
 0.635
Atu3678
Putative siderophore biosynthesis protein.
  
  
 0.634
Atu3675
Peptide synthetase, siderophore biosynthesis protein.
  
  
 0.552
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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