Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
fecBABC transporter, membrane spanning protein (iron(III) dicitrate). (306 aa)    
Predicted Functional Partners:
fecE-3
ABC transporter, nucleotide binding/ATPase protein (iron (III) dicitrate).
 
 0.996
fecC
ABC transporter, membrane spanning protein (iron(III) dicitrate); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.992
fecD
ABC transporter, membrane spanning protein (iron (III) dicitrate); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.991
fhuC
ABC transporter, nucleotide binding/ATPase protein (ferrichrome).
 
 
 0.746
Atu2473
ABC transporter, substrate binding protein.
 
  
 0.691
Atu2476
ABC transporter, nucleotide binding/ATPase protein.
 
  
 0.666
Atu3687
TonB-dependent receptor.
  
  
 0.649
fecE-2
ABC transporter, nucleotide binding/ATPase protein (iron).
 
 
 0.644
fhuB
ABC transporter, membrane spanning protein (ferrichrome); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.644
Atu2474
ABC transporter, membrane spanning protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.626
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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