STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fecCABC transporter, membrane spanning protein (iron(III) dicitrate); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (349 aa)    
Predicted Functional Partners:
fecE-3
ABC transporter, nucleotide binding/ATPase protein (iron (III) dicitrate).
 
 0.997
fecB
ABC transporter, membrane spanning protein (iron(III) dicitrate).
 
 0.992
fecD
ABC transporter, membrane spanning protein (iron (III) dicitrate); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 
0.981
hmuV
ABC transporter, nucleotide binding/ATPase protein (hemin); Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.936
fecE-2
ABC transporter, nucleotide binding/ATPase protein (iron).
 
 
 0.900
fhuC
ABC transporter, nucleotide binding/ATPase protein (ferrichrome).
 
 
 0.897
hmuT
ABC transporter, substrate binding protein (hemin).
 
 
 0.895
fecE
ABC transporter, nucleotide binding/ATPase protein (iron).
 
 
 0.807
Atu3687
TonB-dependent receptor.
 
  
 0.676
Atu2476
ABC transporter, nucleotide binding/ATPase protein.
  
  
 0.631
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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