Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
enhCEnhanced entry protein. (370 aa)    
Predicted Functional Partners:
thiE
Thiamine-phosphate pyrophosphorylase.
       0.886
exoR
Exopolysaccharide production negative regulator.
  
     0.766
Atu3751
Conserved hypothetical protein.
       0.736
flgC
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
   
 
 0.682
suhB
Extragenic suppressor protein SuhB; Belongs to the inositol monophosphatase superfamily.
       0.619
Atu1348
Conserved hypothetical protein.
  
     0.571
Atu3616
Conserved hypothetical protein.
  
     0.559
Atu8167
Putative transmembrane protein.
  
     0.538
Atu2052
Conserved hypothetical protein.
  
   
 0.529
Atu2101
Conserved hypothetical protein.
  
     0.514
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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