Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
exoASuccinoglycan biosynthesis protein. (332 aa)    
Predicted Functional Partners:
exoM-2
UDP-hexose transferase.
 
     0.947
exoL
Succinoglycan biosynthesis protein.
 
   
 0.945
exoO
Succinoglycan biosynthesis glycosyltransferase.
 
 
 0.891
exoK
Endo-1,3-1,4-beta-glycanase.
 
     0.891
exoP-2
Exopolysaccharide polymerization/transport protein.
 
  
 0.796
exoQ-3
Exopolysaccharide production protein.
 
   
 0.742
exoH
Succinoglycan biosynthesis protein.
 
   
 0.736
exoU-2
Succinoglycan biosynthesis glycosyltransferase.
 
 
 0.694
exoF
Exopolysaccharide production protein.
 
   
 0.611
exoN
UTP-glucose-1-phosphate uridylyltransferase.
  
  
 0.602
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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