Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu0480 | Atu1182 | Atu0480 | Atu1182 | Polysaccharide biosynthesis protein. | Conserved hypothetical protein. | 0.702 |
Atu0480 | Atu3549 | Atu0480 | Atu3549 | Polysaccharide biosynthesis protein. | Conserved hypothetical protein. | 0.797 |
Atu0480 | celD | Atu0480 | Atu3302 | Polysaccharide biosynthesis protein. | Cellulose biosynthesis protein. | 0.777 |
Atu0480 | exoH | Atu0480 | Atu4056 | Polysaccharide biosynthesis protein. | Succinoglycan biosynthesis protein. | 0.796 |
Atu0480 | exoL | Atu0480 | Atu4054 | Polysaccharide biosynthesis protein. | Succinoglycan biosynthesis protein. | 0.511 |
Atu0480 | exoQ | Atu0480 | Atu0481 | Polysaccharide biosynthesis protein. | Exopolysaccharide production protein. | 0.836 |
Atu0480 | exoQ-2 | Atu0480 | Atu2356 | Polysaccharide biosynthesis protein. | Exopolysaccharide production protein. | 0.739 |
Atu0480 | exoT | Atu0480 | Atu4057 | Polysaccharide biosynthesis protein. | Succinoglycan biosynthesis transport protein. | 0.413 |
Atu1182 | Atu0480 | Atu1182 | Atu0480 | Conserved hypothetical protein. | Polysaccharide biosynthesis protein. | 0.702 |
Atu1182 | Atu3549 | Atu1182 | Atu3549 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.721 |
Atu1182 | celD | Atu1182 | Atu3302 | Conserved hypothetical protein. | Cellulose biosynthesis protein. | 0.593 |
Atu1182 | exoH | Atu1182 | Atu4056 | Conserved hypothetical protein. | Succinoglycan biosynthesis protein. | 0.794 |
Atu3549 | Atu0480 | Atu3549 | Atu0480 | Conserved hypothetical protein. | Polysaccharide biosynthesis protein. | 0.797 |
Atu3549 | Atu1182 | Atu3549 | Atu1182 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.721 |
Atu3549 | celD | Atu3549 | Atu3302 | Conserved hypothetical protein. | Cellulose biosynthesis protein. | 0.770 |
Atu3549 | exoH | Atu3549 | Atu4056 | Conserved hypothetical protein. | Succinoglycan biosynthesis protein. | 0.786 |
Atu3549 | exoQ | Atu3549 | Atu0481 | Conserved hypothetical protein. | Exopolysaccharide production protein. | 0.681 |
Atu3549 | exoQ-2 | Atu3549 | Atu2356 | Conserved hypothetical protein. | Exopolysaccharide production protein. | 0.618 |
Atu3549 | exoT | Atu3549 | Atu4057 | Conserved hypothetical protein. | Succinoglycan biosynthesis transport protein. | 0.668 |
celD | Atu0480 | Atu3302 | Atu0480 | Cellulose biosynthesis protein. | Polysaccharide biosynthesis protein. | 0.777 |
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