Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu0098 | Atu3770 | Atu0098 | Atu3770 | mutT/nudix family protein. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.904 |
Atu0098 | cinA | Atu0098 | Atu1442 | mutT/nudix family protein. | Competence/damage-inducible protein CinA; Belongs to the CinA family. | 0.903 |
Atu0098 | mazG | Atu0098 | Atu1452 | mutT/nudix family protein. | Conserved hypothetical protein. | 0.912 |
Atu0098 | nadC | Atu0098 | Atu4096 | mutT/nudix family protein. | Nicotinate-mononucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.904 |
Atu0098 | nadD | Atu0098 | Atu2778 | mutT/nudix family protein. | Nicotinic acid mononucleotide adenyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.907 |
Atu0098 | pncB | Atu0098 | Atu0213 | mutT/nudix family protein. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.925 |
Atu0098 | surE | Atu0098 | Atu1702 | mutT/nudix family protein. | Stationary-phase survival protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.909 |
Atu3770 | Atu0098 | Atu3770 | Atu0098 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | mutT/nudix family protein. | 0.904 |
Atu3770 | cinA | Atu3770 | Atu1442 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Competence/damage-inducible protein CinA; Belongs to the CinA family. | 0.905 |
Atu3770 | mazG | Atu3770 | Atu1452 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Conserved hypothetical protein. | 0.903 |
Atu3770 | nadC | Atu3770 | Atu4096 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Nicotinate-mononucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.900 |
Atu3770 | nadD | Atu3770 | Atu2778 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Nicotinic acid mononucleotide adenyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.900 |
Atu3770 | pncB | Atu3770 | Atu0213 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.904 |
Atu3770 | surE | Atu3770 | Atu1702 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Stationary-phase survival protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.912 |
Atu4099 | nadA | Atu4099 | Atu4098 | Conserved hypothetical protein. | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.977 |
Atu4099 | nadB | Atu4099 | Atu4097 | Conserved hypothetical protein. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.911 |
Atu4099 | nadC | Atu4099 | Atu4096 | Conserved hypothetical protein. | Nicotinate-mononucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.970 |
cinA | Atu0098 | Atu1442 | Atu0098 | Competence/damage-inducible protein CinA; Belongs to the CinA family. | mutT/nudix family protein. | 0.903 |
cinA | Atu3770 | Atu1442 | Atu3770 | Competence/damage-inducible protein CinA; Belongs to the CinA family. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.905 |
cinA | mazG | Atu1442 | Atu1452 | Competence/damage-inducible protein CinA; Belongs to the CinA family. | Conserved hypothetical protein. | 0.913 |
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