Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ptsIPhosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family. (755 aa)    
Predicted Functional Partners:
ptsH
Phosphocarrier protein HPr.
  
 
 
 0.929
ptsN
Nitrogen regulatory IIA protein.
  
   
 0.799
hemK
Protoporphyrinogen oxidase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
 
     0.773
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
       0.743
Atu0031
PTS system, IIA component.
  
   
 0.693
lysC
Aspartate kinase, alpha and beta subunit; Belongs to the aspartokinase family.
     
 0.683
Atu4176
Conserved hypothetical protein.
       0.469
Atu0032
Conserved hypothetical protein.
  
     0.456
Atu2774
Carboxy-terminal protease; Belongs to the peptidase S41A family.
   
  
 0.426
Atu4047
Two component sensor kinase/response regulator hybrid.
   
 
 0.415
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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