Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Atu4210ABC transporter, membrane spanning protein (sugars). (352 aa)    
Predicted Functional Partners:
Atu4209
ABC transporter, membrane spanning protein (sugar).
 
  0.997
Atu4211
ABC transporter, nucleotide binding/ATPase protein (sugar); Belongs to the ABC transporter superfamily.
 
  0.988
Atu4208
ABC transporter, substrate binding protein (sugar).
 
  
 0.948
ugpQ
Glycerophosphodiester phosphodiesterase.
  
  
 0.885
malF-2
ABC transporter, membrane spanning protein (sugar).
  
   0.845
Atu1403
ABC transporter, membrane spanning protein.
  
   0.844
Atu2506
ABC transporter, membrane spanning protein (sugar).
  
   0.841
Atu3101
ABC transporter, membrane spanning protein (sugar).
  
   0.830
malF
ABC transporter, membrane spanning protein (maltose).
  
   0.825
Atu3173
ABC transporter, membrane spanning protein (sugar).
  
   0.824
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.