Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu4345 | Atu4352 | Atu4345 | Atu4352 | Conserved hypothetical protein. | Hypothetical protein. | 0.817 |
Atu4345 | clpB-2 | Atu4345 | Atu4344 | Conserved hypothetical protein. | ATP-dependent Clp protease, ATP-binding subunit; Belongs to the ClpA/ClpB family. | 0.921 |
Atu4345 | impA | Atu4345 | Atu4343 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.912 |
Atu4345 | impB | Atu4345 | Atu4342 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.993 |
Atu4345 | impC | Atu4345 | Atu4341 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.970 |
Atu4345 | impH | Atu4345 | Atu4336 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.950 |
Atu4345 | impK | Atu4345 | Atu4333 | Conserved hypothetical protein. | OmpA-like porin. | 0.960 |
Atu4345 | impL | Atu4345 | Atu4332 | Conserved hypothetical protein. | IcmF family protein. | 0.898 |
Atu4345 | impM | Atu4345 | Atu4331 | Conserved hypothetical protein. | Serine/threonine phosphoprotein phosphatase. | 0.891 |
Atu4345 | vgrG-2 | Atu4345 | Atu4348 | Conserved hypothetical protein. | VgrG protein. | 0.961 |
Atu4352 | Atu4345 | Atu4352 | Atu4345 | Hypothetical protein. | Conserved hypothetical protein. | 0.817 |
Atu4352 | clpB-2 | Atu4352 | Atu4344 | Hypothetical protein. | ATP-dependent Clp protease, ATP-binding subunit; Belongs to the ClpA/ClpB family. | 0.817 |
Atu4352 | impA | Atu4352 | Atu4343 | Hypothetical protein. | Conserved hypothetical protein. | 0.907 |
Atu4352 | impB | Atu4352 | Atu4342 | Hypothetical protein. | Conserved hypothetical protein. | 0.822 |
Atu4352 | impC | Atu4352 | Atu4341 | Hypothetical protein. | Conserved hypothetical protein. | 0.770 |
Atu4352 | impH | Atu4352 | Atu4336 | Hypothetical protein. | Conserved hypothetical protein. | 0.769 |
Atu4352 | impK | Atu4352 | Atu4333 | Hypothetical protein. | OmpA-like porin. | 0.770 |
Atu4352 | impL | Atu4352 | Atu4332 | Hypothetical protein. | IcmF family protein. | 0.782 |
Atu4352 | impM | Atu4352 | Atu4331 | Hypothetical protein. | Serine/threonine phosphoprotein phosphatase. | 0.796 |
Atu4352 | vgrG-2 | Atu4352 | Atu4348 | Hypothetical protein. | VgrG protein. | 0.952 |
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