Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
gstRTranscriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (299 aa)    
Predicted Functional Partners:
Atu1367
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.705
sdhX
Dehydrogenase/reductase.
 
     0.703
Atu3355
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.661
Atu4437
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.645
Atu1209
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.638
Atu4122
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.628
Atu3440
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.587
nac
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.577
gbpR
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.492
Atu3701
Glutathione S-transferase.
      
 0.490
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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