Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Atu4402ABC transporter, membrane spanning protein (anion). (269 aa)    
Predicted Functional Partners:
Atu4401
Conserved hypothetical protein.
 
   0.971
Atu4403
ABC transporter, nucleotide binding/ATPase protein (anion).
 
  
 0.937
Atu4404
Conserved hypothetical protein.
 
     0.861
Atu4400
Ferrienterobactin-like protein.
 
  
 0.833
ssuA
ABC transporter, substrate binding protein (aliphatic sulfonate).
 
 
 0.775
Atu4154
ABC transporter, substrate binding protein (aliphatic sulfonate).
 
 
 0.766
ssuB1
ABC transporter, nucleotide binding/ATPase protein (aliphatic sulfonate); Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.761
Atu0158
ABC transporter, membrane spanning protein.
  
     0.727
Atu0159
ABC transporter, nucleotide binding/ATPase protein.
 
 
 0.724
Atu4598
ABC transporter, nucleotide binding/ATPase protein.
 
 
 0.699
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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