Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu4508 | Atu4514 | Atu4508 | Atu4514 | Oxoreductase. | Transcriptional regulator, RpiR family. | 0.639 |
Atu4508 | Atu4555 | Atu4508 | Atu4555 | Oxoreductase. | Conserved hypothetical protein. | 0.461 |
Atu4508 | iolB | Atu4508 | Atu4509 | Oxoreductase. | Conserved hypothetical protein. | 0.919 |
Atu4508 | iolC | Atu4508 | Atu4512 | Oxoreductase. | Myo-inositol catabolism IolC protein. | 0.851 |
Atu4508 | iolD | Atu4508 | Atu4511 | Oxoreductase. | Acetolactate synthase; Belongs to the TPP enzyme family. | 0.905 |
Atu4508 | iolE | Atu4508 | Atu4510 | Oxoreductase. | Conserved hypothetical protein. | 0.911 |
Atu4508 | iolH | Atu4508 | Atu4553 | Oxoreductase. | Myo-inositol catabolism protein. | 0.495 |
Atu4514 | Atu4508 | Atu4514 | Atu4508 | Transcriptional regulator, RpiR family. | Oxoreductase. | 0.639 |
Atu4514 | idhA | Atu4514 | Atu4012 | Transcriptional regulator, RpiR family. | Myo-inositol 2-dehydrogenase. | 0.545 |
Atu4514 | iolB | Atu4514 | Atu4509 | Transcriptional regulator, RpiR family. | Conserved hypothetical protein. | 0.848 |
Atu4514 | iolC | Atu4514 | Atu4512 | Transcriptional regulator, RpiR family. | Myo-inositol catabolism IolC protein. | 0.881 |
Atu4514 | iolD | Atu4514 | Atu4511 | Transcriptional regulator, RpiR family. | Acetolactate synthase; Belongs to the TPP enzyme family. | 0.875 |
Atu4514 | iolE | Atu4514 | Atu4510 | Transcriptional regulator, RpiR family. | Conserved hypothetical protein. | 0.862 |
Atu4514 | iolG | Atu4514 | Atu4554 | Transcriptional regulator, RpiR family. | Myo-inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose). | 0.430 |
Atu4555 | Atu4508 | Atu4555 | Atu4508 | Conserved hypothetical protein. | Oxoreductase. | 0.461 |
Atu4555 | idhA | Atu4555 | Atu4012 | Conserved hypothetical protein. | Myo-inositol 2-dehydrogenase. | 0.936 |
Atu4555 | iolB | Atu4555 | Atu4509 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.701 |
Atu4555 | iolC | Atu4555 | Atu4512 | Conserved hypothetical protein. | Myo-inositol catabolism IolC protein. | 0.615 |
Atu4555 | iolD | Atu4555 | Atu4511 | Conserved hypothetical protein. | Acetolactate synthase; Belongs to the TPP enzyme family. | 0.590 |
Atu4555 | iolE | Atu4555 | Atu4510 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.980 |
page 1 of 5