Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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vdhVanillin: NAD oxidoreductase (Putative); Belongs to the aldehyde dehydrogenase family. (483 aa)    
Predicted Functional Partners:
Atu1416
long-chain-fatty-acid-CoA-ligase.
 
 
 0.644
fad
enoyl-CoA hydratase.
  
 0.643
pobA
4-hydroxybenzoate hydroxylase.
  
 
 0.627
Atu4644
Transcriptional regulator, AraC family.
 
     0.621
Atu1422
Transcriptional regulator, MarR family.
  
   
 0.614
acd-3
acyl-CoA dehydrogenase.
   
 0.575
Atu3072
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.561
gcvT-2
Glycine cleavage system T protein, aminomethyltransferase; Belongs to the GcvT family.
  
  
 0.543
pdhB
Pyruvate dehydrogenase beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 0.538
Atu1415
3-hydroxyacyl-CoA dehydrogenase type II; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.496
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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