Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Atu4650ABC transporter, nucleotide binding/ATPase protein (sugar); Belongs to the ABC transporter superfamily. (346 aa)    
Predicted Functional Partners:
Atu3237
ABC transporter, membrane spanning protein (sugar).
 
  0.906
Atu3238
ABC transporter, membrane spanning protein (sugar).
  
  0.902
Atu3351
ABC transporter, membrane spanning protein (sugar).
  
  0.883
Atu3350
ABC transporter, membrane spanning protein.
 
  0.879
aglF
ABC transporter, membrane spanning protein.
   
  0.866
Atu3168
ABC transporter, membrane spanning protein (sorbitol/mannitol).
   
  0.866
Atu4448
ABC transporter, membrane spanning protein (sorbitol/mannitol).
   
  0.866
Atu4649
Carbohydrate kinase.
  
    0.865
aglE
ABC transporter, substrate binding protein (alpha-glucoside).
   
  0.864
Atu3165
ABC transporter, substrate binding protein (sorbitol/mannitol).
   
  0.864
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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