Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Atu4746ABC transporter, membrane spanning protein (sugar); Belongs to the binding-protein-dependent transport system permease family. (338 aa)    
Predicted Functional Partners:
Atu4747
ABC transporter, membrane spanning protein (sugar); Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.984
Atu4745
ABC transporter, nucleotide binding/ATPase protein (sugar).
 
   0.959
Atu4744
ABC transporter, substrate binding protein (sugar).
 
   0.904
Atu4748
D-tagatose 3-epimerase.
 
    0.823
rbsB-3
ABC transporter, substrate binding protein (ribose).
  
   0.819
rbsB
ABC transporter, substrate binding protein (ribose).
  
   0.800
rbsB-4
ABC transporter, substrate binding protein (ribose).
  
   0.764
rbsB-2
ABC transporter, substrate binding protein (ribose).
  
   0.763
Atu3063
ABC transporter, nucleotide binding/ATPase protein.
  
   0.755
rbsB-5
ABC transporter, substrate binding protein (sugar).
  
   0.745
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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