STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FrcKConserved hypothetical protein. (220 aa)    
Predicted Functional Partners:
Atu4745
ABC transporter, nucleotide binding/ATPase protein (sugar).
       0.669
Atu4746
ABC transporter, membrane spanning protein (sugar); Belongs to the binding-protein-dependent transport system permease family.
       0.669
Atu4747
ABC transporter, membrane spanning protein (sugar); Belongs to the binding-protein-dependent transport system permease family.
       0.669
Atu4748
D-tagatose 3-epimerase.
       0.663
dpe
D-psicose 3-epimerase; Involved in the biosynthesis of D-psicose. Catalyzes the reversible epimerization of D-fructose at the C3 position to yield D- psicose. The enzyme is highly specific for D-psicose and shows very low activity with D-tagatose. The substrate specificity decreases in the following order: D-fructose, D-tagatose, D-ribulose, D-xylulose, and D- sorbose. It shows a higher level of activity for cis ketoses than for trans-ketoses; Belongs to the hyi family.
       0.593
frcA
ABC transporter, nucleotide binding/ATPase protein (sugar).
  
     0.508
frcB
ABC transporter, substrate binding protein (sugar).
  
     0.453
Atu4744
ABC transporter, substrate binding protein (sugar).
       0.440
Atu2156
Conserved hypothetical protein.
  
     0.438
scrK
Fructokinase.
 
   
 0.402
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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