STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOW12798.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)    
Predicted Functional Partners:
AOW13074.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.596
AOW14513.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.576
AOW14512.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.560
AOW12250.1
Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.
 
     0.556
AOW15768.1
Chemotaxis protein CheV; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.546
AOW12217.1
Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.504
AOW12234.1
Flagellar biosynthesis protein FlhF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.495
AOW12222.1
Flagellar motor switch protein FliG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.494
AOW12799.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.468
AOW12245.1
Flagellar basal-body rod protein FlgF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.
 
     0.434
Your Current Organism:
Hydrogenophaga crassostreae
NCBI taxonomy Id: 1763535
Other names: H. crassostreae, Hydrogenophaga crassostreae Baek et al. 2017, Hydrogenophaga sp. LPB0072, JCM 31188, KACC 18705, strain LPB0072
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.