STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOW13300.1Cysteine synthase A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family. (306 aa)    
Predicted Functional Partners:
AOW14344.1
Serine O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
AOW14218.1
Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.989
AOW15591.1
Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
 0.953
AOW13272.1
Cystathionine beta-lyase; Catalyzes the formation of L-homocysteine from cystathionine; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.952
AOW13180.1
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.943
AOW15538.1
Sulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.923
serC
Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
  
 
 0.917
LPB072_05990
Carotenoid 1,2-hydratase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.915
AOW14495.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.911
Your Current Organism:
Hydrogenophaga crassostreae
NCBI taxonomy Id: 1763535
Other names: H. crassostreae, Hydrogenophaga crassostreae Baek et al. 2017, Hydrogenophaga sp. LPB0072, JCM 31188, KACC 18705, strain LPB0072
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