STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOW15752.1Cytochrome C oxidase Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology. (530 aa)    
Predicted Functional Partners:
AOW14316.1
Nitric-oxide reductase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.995
AOW15753.1
Cytochrome C55X NirC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.987
AOW14320.1
Heme d1 biosynthesis radical SAM protein NirJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.982
AOW13512.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.979
AOW14321.1
Protein nirH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.977
AOW14322.1
AsnC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.968
AOW14323.1
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.968
AOW14033.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.926
AOW14324.1
Protein nirF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.924
AOW14317.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.918
Your Current Organism:
Hydrogenophaga crassostreae
NCBI taxonomy Id: 1763535
Other names: H. crassostreae, Hydrogenophaga crassostreae Baek et al. 2017, Hydrogenophaga sp. LPB0072, JCM 31188, KACC 18705, strain LPB0072
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.